This table contains the quality control descriptions of the one-character
flags that appear in variables that end with _qc. These variables appear
in argo_prof_levels(), argo_prof_prof(), and argo_traj_measurement(). See
also argo_reference_history_qctest
for information about specific tests.
argo_reference_qc_flagAn object of class tbl_df (inherits from tbl, data.frame) with 10 rows and 4 columns.
Argo User's Manual, November 2019. doi: 10.13155/29825
library(dplyr, warn.conflicts = FALSE)
with_argo_example_cache({
argo_prof_levels(
"dac/csio/2902746/profiles/BR2902746_001.nc",
vars = c("pres", "pres_qc", "doxy", "doxy_qc")
) %>%
dplyr::left_join(
argo_reference_qc_flag,
by = c("doxy_qc" = "qc_flag")
)
})
#> Extracting from 1 file
#> Warning: '/Users/runner/work/_temp/Library/argodata/cache-test/dac/csio/2902746/profiles/BR2902746_001.nc' is missing variable:
#> 'PRES_QC'
#> # A tibble: 101 × 9
#> file n_levels n_prof pres doxy doxy_qc qc_description qc_comment_realti…
#> <chr> <int> <int> <dbl> <dbl> <chr> <chr> <chr>
#> 1 csio/2… 1 1 0.200 188. 3 Bad data that… Test 15 or Test 1…
#> 2 csio/2… 2 1 0.900 188. 3 Bad data that… Test 15 or Test 1…
#> 3 csio/2… 3 1 1.90 188. 3 Bad data that… Test 15 or Test 1…
#> 4 csio/2… 4 1 2.90 190. 3 Bad data that… Test 15 or Test 1…
#> 5 csio/2… 5 1 4 190. 3 Bad data that… Test 15 or Test 1…
#> 6 csio/2… 6 1 5 190. 3 Bad data that… Test 15 or Test 1…
#> 7 csio/2… 7 1 6 190. 3 Bad data that… Test 15 or Test 1…
#> 8 csio/2… 8 1 7.10 191. 3 Bad data that… Test 15 or Test 1…
#> 9 csio/2… 9 1 8.20 191. 3 Bad data that… Test 15 or Test 1…
#> 10 csio/2… 10 1 9.30 191. 3 Bad data that… Test 15 or Test 1…
#> # … with 91 more rows, and 1 more variable: qc_comment_delayed <chr>
argo_reference_qc_flag
#> # A tibble: 10 × 4
#> qc_flag qc_description qc_comment_realtime qc_comment_delayed
#> <chr> <chr> <chr> <chr>
#> 1 0 No QC performed No QC performed No QC performed
#> 2 1 Good data All real time QC tests p… The adjusted value is s…
#> 3 2 Probably good data NA Probably good
#> 4 3 Bad data that are… Test 15 or Test 16 or Te… An adjustment has been …
#> 5 4 Bad data Data have failed one or … Bad data. Not adjustab…
#> 6 5 Value changed Value changed Value changed
#> 7 6 Not currently used Not currently used Not currently used
#> 8 7 Not currently used Not currently used Not currently used
#> 9 8 Estimated Estimated value (interpo… Estimated value (interp…
#> 10 9 Missing value Missing value Missing value